Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRDRGTIKWTSMMLPEHLTQLKQDLIDVSKIEKPSLDDQQIEEMDILVSEALEFNKELQFKLFHNGFVENVTGRVHYINFEQQKLHVKDQ----NDNTVYINMNNIIGVTYND
1Y96 Chain:A ((17-71))-------------------------------------------------------YKEVRVTASEK---NEYKGWVLTTDPVSANIVLVNFLEDGSMSVTGIMGHAVQTVETM-


General information:
TITO was launched using:
RESULT:

Template: 1Y96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 171 -9358 -54.73 -183.49
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -54.73
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_1Y96.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y96-query.scw
PDB file : Tito_Scwrl_1Y96.pdb: