Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELFKYMEKYDYEQLVFCQDEQSGLKAIIAIHDTTLGPALGGTRMWTYENEEAAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPRKDKNEEMFRAFGRYIQGLN-----GRYITAEDVGTTVEDMDIIHDE---------TDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKAAFGTDSLEGKTIAVQGVGNVAYNLCRHLHEEGANLIVTD-----------INKQSVQRAVEDFG-------ARAVDPDDIYSQDCDIYAPCALGATINDDTIKQLKAKVIAGAANNQLKETRHGDQIHEMGIVYAPDYVINAGGVINVADEL------YGYNAERALKKVEGIYGN-IERVLEISQRDGIPAYLAADRLAEERIERMRRSRSQFLQNGHSVLSRR
3AOG Chain:A ((86-439))-------------------------------HNTARGPAKGGVRY----HPEVTLSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF--ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRIRARIVAEGANGPTTPAAD-DILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQEKKIPLRTAAYVVAATRVLEARALRGLY-----------


General information:
TITO was launched using:
RESULT:

Template: 3AOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1771 44540 25.15 141.40
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 25.15
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_3AOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AOG-query.scw
PDB file : Tito_Scwrl_3AOG.pdb: