Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNEPVKRGKKNRWELNLPIMTYVVADDWIDKLGRETFTLWLRFHTWVDREDELRDYDRIPRSFENIYKKTLGISKSKFYRLIKPLWEYGLIDIIEYEESNRNSTKPKNIIVYEYPLHEIERKYKPLEKLRDWDKDYNSVSKELGKTGGRPRKKDSEEEPEKKPEEVTKKKRKYKLKRVIHNGFKNETVEGFKNETVEGFKNETVTVSKIKPNNYSNIFNNLSNISTNVSNNLLIDDDEEIENEPTGRTINRSLLFSQEDIKQAYQFINRFSVIQLRENFS-------FDKHFEERLVCYLWKAGISTFYTHEISKMIKKIADYEKSKKGRLNPIRDRALYMVNGLVMNRASSQSEHATYKLNQYKKQKEQEKQQQEQQRSRVPFYNWLEEREEQTEGQLPTT
1U6I Chain:A ((170-249))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDEISENDLPKLVIDRNTLLEREEFENPYAMVKAMAALEIAENVADVSVEGCFVEQDKERYVPIVASA-------HEMMRKAAELAD--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1U6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 120 -5024 -41.86 -68.82
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -41.86
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_1U6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U6I-query.scw
PDB file : Tito_Scwrl_1U6I.pdb: