Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLKQYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEK---QIDLVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIELSYLDGRNKLEDYDILTLMKY
4X45 Chain:A ((9-179))--VEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPGFSLLQY


General information:
TITO was launched using:
RESULT:

Template: 4X45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 850 -34961 -41.13 -208.10
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -41.13
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_4X45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X45-query.scw
PDB file : Tito_Scwrl_4X45.pdb: