Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIVSGQLLRPQDIENWQIDQDLNPLLKEMIETPVQFDYHSIAELMFELKLRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWRVSPEGALELKYRMPPSKAIRDIAENGPFYAFECATAIVIIYYLALIDTIGEDKFNASFDRI-------ILYDWHYEKLPIYTETGHHFFLGDCLYFKNPEFDPQKAQWRGENVILLGEDKYFAHGLGILNGKQIIDKLNSFRKKGALQSAYLLSQATRLDVPSLFRIVR
1PG0 Chain:A ((230-342))-------------------------------------------------------------------------------------------------------DISRDAPYFGFEIPNAPGKYFYVWLDAPIG---YMGSFKNLCDKRGDSVSFDEYWKKDS--TAELYHFIGKDIVYFHSL-FWP--AMLEGSN--FRKPSNLFVHGYVTVNGAKMSKSRGTFIK--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 278 -19925 -71.67 -187.97
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -71.67
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.017

(partial model without unconserved sides chains):
PDB file : Tito_1PG0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PG0-query.scw
PDB file : Tito_Scwrl_1PG0.pdb: