Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNVAIVGDGGHGKVIRELINARSDTRLAAVLDDKFKTFEGGKEWYTGPPKAVTELRRLIPDVLFLIAVGNNSVRKQLAERLGLGKDDFITLIHPSAIVSKSAVIGE--GTVIMAGAIIQADARIGAHCIINTGAVAEHDNQISDYVHLSPRATLSGAVSVQEGAHVGTGASVIPQIIIGAWSIVGAGSAVIRSIPDRVTAAGAPARIISSIQTSNKG
2NPO Chain:A ((5-193))-EKIYIYG--GHGLVCEDV--AKNMGYKECIFLDDFKGMK---------------FESTLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAK-----------


General information:
TITO was launched using:
RESULT:

Template: 2NPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1100 -106364 -96.69 -574.94
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -96.69
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2NPO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NPO-query.scw
PDB file : Tito_Scwrl_2NPO.pdb: