Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKLLTMAMPK-GRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMDVTTYVEHGVADVGIAGKDVMLEE---------ERDVYEVLDLNISKCHLAVAGLPNTDWSGV----APRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSY-RMKDDVIDEMASRLSLVVEGETAK
1H3D Chain:A ((7-234))----LRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRV---RDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESK


General information:
TITO was launched using:
RESULT:

Template: 1H3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1002 39544 39.47 191.96
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 39.47
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_1H3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H3D-query.scw
PDB file : Tito_Scwrl_1H3D.pdb: