Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQSPIFLTPVFKEKIWGGTALRDRFGYSIPSESTGECWAISAHPKGPSTVANGPYKGKTLIELWEEHREVFGGVEGDRFPLLTKLLDVKEDTSIKVHPDDYYAGENEEGELGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRLDSNGSPRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSVYKWDINGEAEMAQDESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMPDFTIKGTCTLIVSHI
4FAH Chain:A ((302-334))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFQVFEGAGAVVMNGETTKLEKGDMFVVPSWVP---------------


General information:
TITO was launched using:
RESULT:

Template: 4FAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 74 -13965 -188.71 -423.17
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -188.71
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.740

(partial model without unconserved sides chains):
PDB file : Tito_4FAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FAH-query.scw
PDB file : Tito_Scwrl_4FAH.pdb: