Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEF-DFT-------DLFIPQVRRWIEKLKAELR----LPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFGQP-------------AWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
4CUG Chain:A ((19-245))---------ETILGGLAPEEFLANYWQKRPLLIR------QALPGFRSPITPEEL-------------AGLACEEGVTARLILEKGGAYPWEVRYGPFEPEDFVALPPTHWTLLVQEVDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINH-----RPVEREEL--VPGLEVRLLAHFE--------PDAEWI-LEPGDVLYLPPRIPHYGVALEDCMTFSIGFRAPDQAELAEAMPRMAAWLD------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1034 -49871 -48.23 -246.88
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -48.23
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_4CUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CUG-query.scw
PDB file : Tito_Scwrl_4CUG.pdb: