Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGAE-------IVSPGSVLVSGRLLSDITRALPNKPVDV-HVEGNRVALTCGNARFSLPTMPVEDYPTLPTLPEETGL-LPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVL--AATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALV--ADRGAQVRMEFADGSVRLSAGADDVGRAEEDLVVDY-AGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG |
| 2AWA Chain:A ((16-388)) | --------------FSINKNLFLQALNTTKRAISSKNAIPILSTVKIDVTNEGITLIGSNGQISIENFISQKNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDSEQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHF-VLSQHKELKTVATDSHRLSQKKLTLEKNSDDFD--VVIPSRSLREF--SAVFTDDIE---TVEIFFANNQILFRSENISFY-TRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVSAHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPADTDE-----------------DFMQLITPVR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225649 for 2745 contacts (-82.2/contact) +
2D Compatibility (PS) -38490 + (NN) -11949 + (LL) 1872
1D Compatibility (HY) -24400 + (ID) 5500
Total energy: -304116.0 ( -110.79 by residue)
QMean score : 0.557
|
|
|