Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
3AJM Chain:A ((120-169))
------------------------FLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AJM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1261 for 224 contacts (-5.6/contact) +
2D Compatibility (PS) -5350 + (NN) 309 + (LL) 4468
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -5684.0 ( -25.38 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3AJM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJM-query.scw
PDB file :
Tito_Scwrl_3AJM.pdb
: