Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR |
2MSK Chain:A ((23-80)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLAL-LKQIKQRHPMLPVII---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6400 for 336 contacts (-19.0/contact) +
2D Compatibility (PS) -5998 + (NN) -1376 + (LL) 23584
1D Compatibility (HY) -4000 + (ID) 900
Total energy: 4910.0 ( 14.61 by residue)
QMean score : 0.119
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