Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGKRRLAYEIAKHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH
1FKA Chain:F ((1-95))
MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQE-
General information:
TITO was launched using:
RESULT:
Template:
1FKA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56474 for 642 contacts (-88.0/contact) +
2D Compatibility (PS) -10217 + (NN) -2366 + (LL) 44
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -79863.0 ( -124.40 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1FKA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FKA-query.scw
PDB file :
Tito_Scwrl_1FKA.pdb
: