Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
3A5U Chain:A ((1-119))
MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSF-TREGEKRTVVEVEVDEIGPSLRYATAKVNK---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51055 for 733 contacts (-69.7/contact) +
2D Compatibility (PS) -12680 + (NN) -3638 + (LL) -1148
1D Compatibility (HY) -13600 + (ID) 5550
Total energy: -87671.0 ( -119.61 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3A5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A5U-query.scw
PDB file :
Tito_Scwrl_3A5U.pdb
: