Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADEIRRAR-ETKSVRDLEHANEIKAAIEALGPIALPVKTSADSGKLFGSVTAADVVAAIKKAGGPNLDKRIVRLPKTHIKAVGTHFVSVHLHPEIDVEVSLDVVAQS
5GAE Chain:H ((1-149))
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATK-KNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASK-AGDEGKLFGSIGTRDIADAV-TAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE-
General information:
TITO was launched using:
RESULT:
Template:
5GAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92214 for 989 contacts (-93.2/contact) +
2D Compatibility (PS) -16345 + (NN) -5613 + (LL) -84
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -127306.0 ( -128.72 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_5GAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5GAE-query.scw
PDB file :
Tito_Scwrl_5GAE.pdb
: