Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD |
| 3WGU Chain:G ((27-48)) | -------------------------------------------------------------------------------------------------------------------------------RNGGLIFAALAFIVGLIIILSK----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6540 for 78 contacts (-83.8/contact) +
2D Compatibility (PS) -2413 + (NN) -1628 + (LL) 18420
1D Compatibility (HY) -2000 + (ID) 100
Total energy: 5739.0 ( 73.58 by residue)
QMean score : -0.106
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