Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSH-------PLGHRWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
2NS9 Chain:A ((9-157)) | -----------------------------------------------------------------------WGLKVRYEGSFEVSKTPEEVFEFLTDPKRFSRAFPG--FKSVEVEDGSFTIELRLSL--GPLRGDARVRASFEDLEKPSKATVKGSGRGAGSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGLAA---SMGGRV-LDSLARRMINDVISGVKRELGEA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25048 for 1016 contacts (-24.7/contact) +
2D Compatibility (PS) -15284 + (NN) -1952 + (LL) 4020
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -44464.0 ( -43.76 by residue)
QMean score : 0.363
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