Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHP-SPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIE-DKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
4FFA Chain:A ((8-257)) | ITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPI------------------------------NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNR--------------------PDFRT---EHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITM-----PENTIRW----NWAPGDVAIWDNRATQHRA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110579 for 1503 contacts (-73.6/contact) +
2D Compatibility (PS) -21475 + (NN) -5079 + (LL) 3880
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: -141653.0 ( -94.25 by residue)
QMean score : 0.482
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