Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIK-VRVSAQGIKVIDRDGHRGRRRAARAGSAPAHFARQAGSSLRTAAIL
2JZ6 Chain:A ((6-61))
MAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLP--DGTIKRMRVCTSCLK-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4740 for 286 contacts (-16.6/contact) +
2D Compatibility (PS) -5812 + (NN) -3270 + (LL) 2452
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -16420.0 ( -57.41 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2JZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JZ6-query.scw
PDB file :
Tito_Scwrl_2JZ6.pdb
: