Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVTVMGLERQLALW-----PPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSA-LGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARR-----LHLDVRWVVALIVINLA--FTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
4QO2 Chain:A ((4-185))
------------------------------RER-AGPVTWVMMIACVVVFIAMQI--LG-DQEVMLWLAWPFDPTLKF-EFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPW---FGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLN------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153505 for 1315 contacts (-116.7/contact) +
2D Compatibility (PS) -17067 + (NN) -2559 + (LL) 5788
1D Compatibility (HY) -18000 + (ID) 2250
Total energy: -187593.0 ( -142.66 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_4QO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QO2-query.scw
PDB file :
Tito_Scwrl_4QO2.pdb
: