Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAERAGHQWCLFLDRDGVINRQVVGDY-VRNWRQFEWLPGAARALKKLRAWAPYIVVVTNQQGVGAGLMSAVDVMVIHRHLQMQLASDGVLIDGFQVCPHHRSQRCGCRKPRPGLVLDWLGRHPDSEPLLSIVVGDSLSDLELAHNVAAAAGACASVQIGGASSGGVADASFDSLWEFAVAVGHARGERG
2FPR Chain:A ((14-152))
--------QKYLFIDRDGTLISEP--DFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYL-----MDRANSYVIGDRATDIQLAENM-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81542 for 958 contacts (-85.1/contact) +
2D Compatibility (PS) -14618 + (NN) -10394 + (LL) 2796
1D Compatibility (HY) -8400 + (ID) 2250
Total energy: -114408.0 ( -119.42 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_2FPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPR-query.scw
PDB file :
Tito_Scwrl_2FPR.pdb
: