Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
4RZK Chain:A ((85-158))
------------------------------------------PLADVIEKGDEIKVVAEVPGVN-KEDIKVKVTNGG--KKLVITAKSEDRQ-------------------YYKEIDLPAEVDEKAAKANFKNGVLEI---------------------
General information:
TITO was launched using:
RESULT:
Template:
4RZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46325 for 479 contacts (-96.7/contact) +
2D Compatibility (PS) -7817 + (NN) -3157 + (LL) 5144
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -59755.0 ( -124.75 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4RZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RZK-query.scw
PDB file :
Tito_Scwrl_4RZK.pdb
: