Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKD------MVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEK-LYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGVLKVDGEVG--------VKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKSLTH |
| 1GYN Chain:A ((24-353)) | ---------------AKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAK-KLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELG----------------ALYTQPEDVDYAYTEL-SKISPRFTIAASFGNV--------VVLTPTILRDSQEYVSKKHNLPHNS--LNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKAN-EAYLQ--GQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135901 for 2406 contacts (-56.5/contact) +
2D Compatibility (PS) -31755 + (NN) -15009 + (LL) 1996
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -211519.0 ( -87.91 by residue)
QMean score : 0.504
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