Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHESRLASARLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKGS---PGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKP-GRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN
1G6C Chain:A ((20-220))
----------VYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKF--AEKAQAAC-------REAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIG-DMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIE-AVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI----
General information:
TITO was launched using:
RESULT:
Template:
1G6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126099 for 1660 contacts (-76.0/contact) +
2D Compatibility (PS) -22496 + (NN) -19478 + (LL) 2412
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -179011.0 ( -107.84 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1G6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6C-query.scw
PDB file :
Tito_Scwrl_1G6C.pdb
: