Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVTVGSMNERVPDSSGLPLRAMVMVLLFLGVVFLLLVWQALG-SSPNSEDDSSAISTMTTTTAAPTSTSVKPAAPRAEVRVYNISGTEGAAARTADRLKAAGFTVTDVGNLSLPDVAATTVYYTEVEGERATADAVGRTLGAAVELRLPELSDQPPGVIVVVTG |
4BKF Chain:A ((380-443)) | ----CGSGVHYTPQQNGLKTTKVSITDLLAHTNYTFEIWAVNGVSKYNPNPDQSVSVTVTTNQAAPSS------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14834 for 256 contacts (-57.9/contact) +
2D Compatibility (PS) -7005 + (NN) -3601 + (LL) 6876
1D Compatibility (HY) 800 + (ID) 950
Total energy: -18714.0 ( -73.10 by residue)
QMean score : 0.262
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