Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLG---------YVFNPLSIFWCHDRDGQLRHVIAEVHNT----YGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR |
| 4G6V Chain:B ((16-98)) | -------------------------------------------------AESDLNKIRSNHSE--LFEGKFLISPVRDADFSLKEIAAEHGLVAESFFLVSLNDKNSADLIPIVSKILVDGFNGGAILILQDNE---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29816 for 376 contacts (-79.3/contact) +
2D Compatibility (PS) -7707 + (NN) -4470 + (LL) 11356
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -32687.0 ( -86.93 by residue)
QMean score : 0.196
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