Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MMTLKVAIGPQNAFVLRQGIRREYVLVIVALCGIADGALIAAGVGG-------FAALIHAHPNMTLVARFGGAAFLIGY----ALLAARNAWRPSG----LVPSESGPAALIGVVQMCLVV-TFLNPHVYLDTVVLIGALANEES--------DLRWFFGAGAWAASVVWFAVLG----FSAGRLQPFFAT--PAAWRI--LDALVAVTMIGVAVVVLVTSPSVPTANVALII------ |
| 3DNF Chain:A ((1-281)) | MVDIIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDIGEALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174926 for 1310 contacts (-133.5/contact) +
2D Compatibility (PS) -21811 + (NN) -7283 + (LL) 0
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -204920.0 ( -156.43 by residue)
QMean score : 0.133
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