Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVPAVSPQPILAPLTPAAIFLVATI--GADGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGP-RPTELHPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPS---GPIAIKATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVRHNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFLDHPPPLPQAATPTLAAGSLSIGSLKGSPR |
| 2GVK Chain:A ((14-312)) | -------PQDVAGKQGENVIFIVYNLTDSPDTVDKVKDVCANFSAMIRSMRNRFPDMQFSCTMGFGADAWTRLFPDKGKPKELSTFSEIKGEKYTAVSTPGDLLFHIRAKQMGLCFEFASILDEKLKGAVVSVDETHGFRYMDGKAIIGFVDGTENPAVDENPYHF--AVIGEEDADFAGGSYVFVQKYIHDMVAWNALPVEQQEKVIGRHKFNDVELSDEEKPGNAHNAVTNIGDD----LKIVRANMPFANTSKGEYGTYFIGYASTFSTTRRMLENMFIGSPAGNTDRLLDFSTAITGTLFFVPSYDLL----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138577 for 2448 contacts (-56.6/contact) +
2D Compatibility (PS) -31642 + (NN) -20202 + (LL) 1200
1D Compatibility (HY) -29200 + (ID) 7500
Total energy: -225921.0 ( -92.29 by residue)
QMean score : 0.556
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