Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRT-QSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG |
3WJD Chain:A ((34-174)) | ----------------------------------------------------------------------LLGTWRGQGEGEYPTIPSWRYGEEIRFSHSGKPVIAYTQKTWKLESGA----PLLAESGYFR-------PRPDGSIEVVIACSTGLVEVQKGTYNVDEQSIKLKSDLVGNASK---VKEISREFELVD-GKLSYVVRLSTTTNPLQPLLKAILDKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28745 for 968 contacts (-29.7/contact) +
2D Compatibility (PS) -14401 + (NN) -3848 + (LL) 3880
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -56614.0 ( -58.49 by residue)
QMean score : 0.320
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