Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADQLTPHLEIPTAIKPRDGRFGSGPS---KVRLEQLQ----TLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKRSL--HLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSA-------PEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD-DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL |
2BHX Chain:A ((6-353)) | --------------------NFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEK---ALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ-NFPE-INHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-------VPTMLQYATHIKS---DSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNGHRSVGG--CRASIYNAVPIDACIALRELM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BHX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144462 for 2788 contacts (-51.8/contact) +
2D Compatibility (PS) -36163 + (NN) -22953 + (LL) 3216
1D Compatibility (HY) -15200 + (ID) 3950
Total energy: -219512.0 ( -78.73 by residue)
QMean score : 0.447
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