Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
4M1P Chain:A ((14-102))
MIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGMQLLERHANHCVAKAIREGSGEQSLRELMDVIKQF------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18872 for 479 contacts (-39.4/contact) +
2D Compatibility (PS) -9709 + (NN) -6641 + (LL) 924
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -43248.0 ( -90.29 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4M1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M1P-query.scw
PDB file :
Tito_Scwrl_4M1P.pdb
: