Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGH-------------WVRSFDRAPSLLP--AHPQLEVLQGDITDADVCAAAVDGIDTIFHTAA---IIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG--NGDQTMFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 1R66 Chain:A ((2-269)) | ---------------RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTE-------TNVQGTQTLLQCAVDAGVGRVVHVSTDEVY---GSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV--REWVHTDDHCRGIA---LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110647 for 1933 contacts (-57.2/contact) +
2D Compatibility (PS) -26855 + (NN) -14663 + (LL) 9100
1D Compatibility (HY) -12000 + (ID) 3950
Total energy: -159015.0 ( -82.26 by residue)
QMean score : 0.383
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