Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGWFAHTLRPAMLAAGRSDRLGRIVERS-PLTRGVV--------RRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAVRAYLGLLDVLGR----RGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDN----ARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVD-----FPWLGTVVQAYLRRT------LADCAELAAVGARVRLCKGAY-DEPASVAYRDAAQ---------VTD-SYLRCLRVLTAGRG--YPMVATHDPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGA------GNHVRVYVPFGTR--WYGYFLRRLAERPANLAFFLRALTDRRRARGCAER |
| 4JNY Chain:A ((141-484)) | ---------------ASLSRSLNRII---EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPG-----ISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIAAEESDRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQN-YYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151119 for 2173 contacts (-69.5/contact) +
2D Compatibility (PS) -31028 + (NN) -4222 + (LL) 3024
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -205695.0 ( -94.66 by residue)
QMean score : 0.327
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