Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGAN-VHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSD-APPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNAR--LVLRRETVDDLLSLEVR |
| 3VAB Chain:A ((31-437)) | ---------------------GVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKI---KSENKFG--IPRDKARAAYARAASLPGLNVVGIDMHIGSQIIDLEPFDNA----FALMAELVKELQADGH-NIRHVDVGGGLGIPYRTP------PPPPVAYAQIVAKHIKPLGL---KTVFEPGRLIVGNAGLLVTEVIFVKEGDA-----KNFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPA-PGDLIAICTTGAYGAVLSSTYN--SRLLIPEVLGDGERYHVVRPRRTYEELLALD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284949 for 3399 contacts (-83.8/contact) +
2D Compatibility (PS) -42300 + (NN) -8983 + (LL) 2872
1D Compatibility (HY) -25200 + (ID) 7350
Total energy: -365910.0 ( -107.65 by residue)
QMean score : 0.511
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