Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPE--AVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAA--QGDFDKVVVNRRLESACAELVSLLVGTAPGSP
4F4J Chain:A ((15-199))------------------SMSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYY--GSTVASVKQVSKSGKTCILDIDMQGVKSV-KAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIF-------


General information:
TITO was launched using:
RESULT:

Template: 4F4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104554 for 1270 contacts (-82.3/contact) +
2D Compatibility (PS) -20435 + (NN) -11302 + (LL) -180
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -155021.0 ( -122.06 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_4F4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F4J-query.scw
PDB file : Tito_Scwrl_4F4J.pdb: