Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEPTVARPDIDPVLKML---LDTFPV--TFTAADGVEVARARL-----RQLKTPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAP-ILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
| 1JJI Chain:A ((6-307)) | ----------IDPVYYQLAEYFDSLPKFDQFSSAREYREAINRIYEERNRQLSQHERVE---RVEDRTIKGRNG--DIRVRVYQQ---KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIF----ADLENLPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQ-IAAL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -185162 for 2574 contacts (-71.9/contact) +
2D Compatibility (PS) -31041 + (NN) -14525 + (LL) 1360
1D Compatibility (HY) -21200 + (ID) 6100
Total energy: -256668.0 ( -99.72 by residue)
QMean score : 0.482
|
|
|