Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLDA---VPF-RLSIDDGIEAVRQRLRDLPRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAP--VVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAF-SRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
| 4P9N Chain:A ((3-289)) | -------------LDPRIKKLLESGFVVPIGKASVDEVRKIFRQLASAAPKAEVR---KVEDIKIPGSETSINARVYFP-----KAKGPYGVLVYLHGGGFVIGDVESYDPLCRAITNACNCVVVSVDYRLAPEYKFPSAVIDSFDATNWIYNNLDKFDGEMG-IAIAGDSAGGNLAAVVALLSK--GKLDLKYQILIYPAVGFDSVSRSMIEYSDGFFLTREHIEWFGSQYLRSPADLLD--FRFSPIIAQDLSGLPPALIITAEYDPLRDPEEAYANRLLQAGVPVTSVRFNNVIHGFLSFFPLIDQGKDA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214954 for 2480 contacts (-86.7/contact) +
2D Compatibility (PS) -30299 + (NN) -20431 + (LL) 1316
1D Compatibility (HY) -24000 + (ID) 5300
Total energy: -293668.0 ( -118.41 by residue)
QMean score : 0.575
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