Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLE---KQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDA----DSLGWLRDFLRLHTGGLVVISHN---VDLVADVVNKVWFLDAVRGQVDV---YNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHDTLDNDATVWENVRHAAPDAGEQ-DLRGLLGAFMFTGPQLE--------------QPAGTLSGGEKTRLALAGLVASTANVLLLDEPTNNLDPASREQVLDALRSY----RGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA |
| 4CRM Chain:P ((101-541)) | --------------------------RPGQVLGLVGTNGIGKSTALKILAGKQKP---------NLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYV-------DNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKILQL-ENVLKRDIEKLSGGELQR-------FAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLA-PTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADA--------------------------------TEDLQNDSASR-AFSYPS-----------LKKTQGDF-VLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKL---------------NVSMKPQKIAPKFPGTVRQLFFKKIRGQFL--NPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60980 for 3092 contacts (-19.7/contact) +
2D Compatibility (PS) -43147 + (NN) -9304 + (LL) 10576
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -137155.0 ( -44.36 by residue)
QMean score : 0.235
|
|
|