Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDRIVMEVSRYRPEIESAPTFQAYEVPLTREWAVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPDFLGPAAIALGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYKLTAATHALKKLLFPWGGG
4KX6 Chain:B ((3-242))
-MKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDG-MKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRT-ADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKP----
General information:
TITO was launched using:
RESULT:
Template:
4KX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131402 for 1904 contacts (-69.0/contact) +
2D Compatibility (PS) -24758 + (NN) -8603 + (LL) -432
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -194845.0 ( -102.33 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_4KX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KX6-query.scw
PDB file :
Tito_Scwrl_4KX6.pdb
: