Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGLATT-NPSAAALAAMTAVQARLL-DLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLAT-LGVALVAVGIGLRLVFG-------EMSLTAGLTVLLLAPEVYWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARG--GVIRLERLSVRGRDGRAPY--DLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVL---LGPVDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR |
| 3QF4 Chain:A ((148-548)) | ---------------------------------------------------------------------------------------------------------------------PLLFVGGIVMAVSINV------KLSSVLIFLIP--PIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRRE--------EYENENFRKANESLRRSIISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGL-KRYTKGCTTFIITQKIPTALLADKIL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214283 for 2687 contacts (-79.7/contact) +
2D Compatibility (PS) -42625 + (NN) -26321 + (LL) 10536
1D Compatibility (HY) -33600 + (ID) 5100
Total energy: -311393.0 ( -115.89 by residue)
QMean score : 0.454
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