Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQLSPET----LIIDCGADFRLTDAAVWERFYGS----SHAGSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIEPA-VTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQ--LRAAYEKAYHAEPFIYLMPEGQ----LPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
5EIN Chain:A ((2-344)) | -------DKKTLSIVGASGYAGGEFLRLALSHPY-----LEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFIPPEK--LEPADILVLALPHG---VFAREFDRYSALAPILIDLSADFRLKDPELYRRYYGEHPRPDLLGCFVYAVPEL--YREALKGADWIAGAGANATATLLGLYPLLKAGVLKPTPIFVTLLISTSAAGAEASPASHHPERAGSIRVYKPTG-HRHTAEVVENLPGRPE----VHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPETLGLDFPGLHP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5EIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -222635 for 2864 contacts (-77.7/contact) +
2D Compatibility (PS) -35972 + (NN) -13671 + (LL) 1456
1D Compatibility (HY) -25200 + (ID) 6600
Total energy: -302622.0 ( -105.66 by residue)
QMean score : 0.452
|
|
|