Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEAD-MTMGWYPIAEAARRVLRGEI-VNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
1V8L Chain:A ((29-169))
-------------------------------------EIVEHKPAVAVIALRE-GRMLFVRQMRPAVGLAPLEIPAGLIE-PGEDPLEAARRELAEETGL-SGDLTYLFSYFVSPGFTDEKTHVFLAENLKEV---EA--DEDEAIEVVWMRPEEALERHQRGEVEFSATGLVGVLYYHAFLRG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1V8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75262 for 981 contacts (-76.7/contact) +
2D Compatibility (PS) -14862 + (NN) -4470 + (LL) 4540
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -104504.0 ( -106.53 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_1V8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V8L-query.scw
PDB file :
Tito_Scwrl_1V8L.pdb
: