Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE |
| 3PI2 Chain:A ((110-136)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAYDILIHYMEDHNHMVGGAKDAWEVF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8037 for 123 contacts (-65.3/contact) +
2D Compatibility (PS) -2981 + (NN) -1786 + (LL) 12476
1D Compatibility (HY) -800 + (ID) 500
Total energy: -1628.0 ( -13.24 by residue)
QMean score : 0.271
|
|
|