Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRAN------YLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVL------------------EFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQLTARVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERPNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRAAGAGSRRDTRVLRGWSTLPVTLGPARSMVSP |
| 3R9C Chain:A ((15-414)) | -----------------------AQGLLLQLL-DPATRADPYPIYDRIRRGGPLALPEANLAVFSSFSDCDDVLRHPSSCSDRTKSTIFQ-------RQLAAET---QPRPQGPASFLFLDPPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD--AVDGPEFNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRAL-------------IDERRRTPGEDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQI-RHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEPEYKRNLTLRGMSTLSIAV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205306 for 2925 contacts (-70.2/contact) +
2D Compatibility (PS) -40046 + (NN) -15392 + (LL) 2912
1D Compatibility (HY) -22800 + (ID) 7300
Total energy: -287932.0 ( -98.44 by residue)
QMean score : 0.443
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