Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTTMIKTAVAVVAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP |
| 2C9R Chain:A ((76-101)) | ------------------------------------------------------------------------------------------------------AGTYKVDWRAVSSD---------TFPITGSVTFKV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -626 for 95 contacts (-6.6/contact) +
2D Compatibility (PS) -2914 + (NN) -2046 + (LL) 9784
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 2548.0 ( 26.82 by residue)
QMean score : 0.247
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