Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDCRARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILARAWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA |
2DUY Chain:A ((25-66)) | ------------------------------------------------------SLEELMALPGIGPVLARRIVEGR-----PYARVEDLLKVKGIGPATL----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6192 for 226 contacts (-27.4/contact) +
2D Compatibility (PS) -4591 + (NN) -4821 + (LL) 11476
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -7078.0 ( -31.32 by residue)
QMean score : 0.654
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