Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2M6O Chain:A ((28-69))
---------------------------QAVEYACEKGHRFEMPFSVEAEIPPEWECKVCGAQALLVDGD-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2M6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8309 for 231 contacts (-36.0/contact) +
2D Compatibility (PS) -4556 + (NN) -2764 + (LL) 4988
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -13891.0 ( -60.13 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_2M6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M6O-query.scw
PDB file :
Tito_Scwrl_2M6O.pdb
: