Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLQGKVVFITGAARGIGAEVARRLHNKGAKLVLTDLSK---------------SELAVMGAELGGDDRLLTVVADVRDLPAMQAAAETAVERFGGIDVVVANAGIASYGSVL-KVDPQAFRRVLDVNLLGNFHTVRATLPALID--RRGYVLIVSSLAAFAAPPGMAPYNMSKAGNEHFANALRLEVAHLGVSVGSAHMSWIDTALVRDTKA--------------DLPAFAELLARLPWPLNKTTSVNKCAAAFVNGIEGRKDRVYCPGWVALFRWLKPLLSTRVGQRPIRNTVAKLMPQMDAEVAALGRFASAYTESLENS |
| 5EJ2 Chain:A ((37-292)) | -----GKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDL--DRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWVDASDISN-AVLFLASDESR------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138092 for 1904 contacts (-72.5/contact) +
2D Compatibility (PS) -24077 + (NN) -8837 + (LL) 4876
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -184530.0 ( -96.92 by residue)
QMean score : 0.481
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