Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
2COB Chain:A ((9-59))
---GRYRQYNSEILEEAISVVMSG-------KMSVSKAQSIYGI-PHSTLEYKVKERLGTLK----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2COB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40806 for 313 contacts (-130.4/contact) +
2D Compatibility (PS) -5602 + (NN) -2920 + (LL) 3552
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -48326.0 ( -154.40 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_2COB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COB-query.scw
PDB file :
Tito_Scwrl_2COB.pdb
: