Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINYQFGDVDAHGAMIRAQAGLLEAEHQAIVRDVLAAGDFWGGAGSVACQEFITQLGRNFQVIYEQANAHGQKVQAAGNNMAQTDSAVGSSWA
4LWS Chain:B ((9-91))
DYTRANFGGLSEGEAQFSMTARALLDELTDLEGKLRAKLDRWDGDAQAAYWNYQKEWDAAAKDMQNVVAQLGVAIREAHDNYQ-----------
General information:
TITO was launched using:
RESULT:
Template:
4LWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12783 for 408 contacts (-31.3/contact) +
2D Compatibility (PS) -8910 + (NN) -1389 + (LL) 476
1D Compatibility (HY) 0 + (ID) 700
Total energy: -23306.0 ( -57.12 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_4LWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWS-query.scw
PDB file :
Tito_Scwrl_4LWS.pdb
: